Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12723357 chr1:243118512 A/G TMSB4Y chrY:15815447-15817904:+ 0.47 8.01 1.35E-14 Box Plot
BLCA rs12723357 chr1:243118512 A/G TTTY15 chrY:14774265-14804162:+ 0.45 7.74 8.66E-14 Box Plot
BLCA rs12723357 chr1:243118512 A/G USP9Y chrY:14813160-14972764:+ 0.46 8.38 1.02E-15 Box Plot
BLCA rs12723357 chr1:243118512 A/G UTY chrY:15360259-15592553:- 0.47 8.99 1.17E-17 Box Plot
BLCA rs12726803 chr1:88297927 C/T GGT1 chr22:24979718-25024972:+ 0.69 6.15 1.91E-9 Box Plot
BLCA rs12741415 chr1:202474774 A/G BCORL2 chrY:21617317-21665039:- -0.41 -6.31 7.58E-10 Box Plot
BLCA rs12741415 chr1:202474774 A/G CYorf15A chrY:21729235-21752308:+ -0.58 -11.11 4.79E-25 Box Plot
BLCA rs12741415 chr1:202474774 A/G CYorf15B chrY:21758442-21767697:+ -0.5 -10.44 1.3E-22 Box Plot
BLCA rs12741415 chr1:202474774 A/G DDX3Y chrY:15016019-15032390:+ -0.51 -9.52 2.02E-19 Box Plot
BLCA rs12741415 chr1:202474774 A/G EIF1AY chrY:22737611-22755040:+ -0.58 -11.02 1.06E-24 Box Plot
BLCA rs12741415 chr1:202474774 A/G KDM5D chrY:21865751-21906825:- -0.56 -10.89 3.14E-24 Box Plot
BLCA rs12741415 chr1:202474774 A/G NCRNA00185 chrY:21034388-21040114:- -0.56 -9.96 6.46E-21 Box Plot
BLCA rs12741415 chr1:202474774 A/G NCRNA00230B chrY:20488419-20492735:+ -0.52 -8.06 9.76E-15 Box Plot
BLCA rs12741415 chr1:202474774 A/G NLGN4Y chrY:16634518-16957530:+ -0.48 -9.06 6.78E-18 Box Plot
BLCA rs12741415 chr1:202474774 A/G RPS4Y1 chrY:2709527-2800041:+ -0.36 -6.31 7.77E-10 Box Plot